{ "_id": "6acdfc34a14063b82c3adf6e", "Package": "metagear", "Version": "0.7", "Date": "2021-02-15", "Title": "Comprehensive Research Synthesis Tools for Systematic Reviews\nand Meta-Analysis", "Authors@R": "person(given = \"Marc J.\", family = \"Lajeunesse\", role = c(\"aut\",\"cre\"), \nemail = \"lajeunesse@usf.edu\", comment = c(ORCID = \"0000-0002-9678-2080\"))", "Description": "Functionalities for facilitating systematic reviews, data\nextractions, and meta-analyses. It includes a GUI (graphical\nuser interface) to help screen the abstracts and titles of\nbibliographic data; tools to assign screening effort across\nmultiple collaborators/reviewers and to assess inter- reviewer\nreliability; tools to help automate the download and retrieval\nof journal PDF articles from online databases; figure and image\nextractions from PDFs; web scraping of citations; automated and\nmanual data extraction from scatter-plot and bar-plot images;\nPRISMA (Preferred Reporting Items for Systematic Reviews and\nMeta-Analyses) flow diagrams; simple imputation tools to fill\ngaps in incomplete or missing study parameters; generation of\nrandom effects sizes for Hedges' d, log response ratio, odds\nratio, and correlation coefficients for Monte Carlo\nexperiments; covariance equations for modelling dependencies\namong multiple effect sizes (e.g., effect sizes with a common\ncontrol); and finally summaries that replicate analyses and\noutputs from widely used but no longer updated meta-analysis\nsoftware (i.e., metawin). Funding for this package was\nsupported by National Science Foundation (NSF) grants\nDBI-1262545 and DEB-1451031. CITE: Lajeunesse, M.J. (2016)\nFacilitating systematic reviews, data extraction and\nmeta-analysis with the metagear package for R. Methods in\nEcology and Evolution 7, 323-330 .", "Type": "Package", "biocViews": "", "SystemRequirements": "Tcl/Tk toolkit (X11 Quarts for Mac)", "VignetteBuilder": "R.rsp", "License": "GPL (>= 2)", "URL": "http://lajeunesse.myweb.usf.edu/ https://github.com/mjlajeunesse/\nhttps://www.youtube.com/c/LajeunesseLab/", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.1.1", "Config/pak/sysreqs": "libicu-dev tcl tk tk-dev libx11-dev", "Repository": "https://mjlajeunesse.r-universe.dev", "Date/Publication": "2021-05-05 13:58:24 UTC", "RemoteUrl": "https://github.com/mjlajeunesse/metagear", "RemoteRef": "HEAD", "RemoteSha": "37354985d3e48c8e574bf7b1592bdb8122d8cc6d", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-13 09:27:43 UTC", "User": "root" }, "Author": "Marc J. Lajeunesse [aut, cre] (ORCID:\n)", "Maintainer": "Marc J. 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"title": "Assigns title/abstract screening efforts to a team.", "topics": [ "effort_distribute" ] }, { "page": "effort_initialize", "title": "Formats a reference dataset for title/abstract screening efforts.", "topics": [ "effort_initialize" ] }, { "page": "effort_merge", "title": "Merges multiple files that had title/abstract screening efforts distributed across a team.", "topics": [ "effort_merge" ] }, { "page": "effort_redistribute", "title": "Redistributes title/abstract screening efforts among a review team.", "topics": [ "effort_redistribute" ] }, { "page": "effort_summary", "title": "Provides a text summary of screening efforts among the reviewing team.", "topics": [ "effort_summary" ] }, { "page": "example_references_metagear", "title": "A collection of bibliographic references", "topics": [ "example_references_metagear" ] }, { "page": "figure_add", "title": "Manually add/detect points to a scatter plot figure.", "topics": [ "figure_add" ] }, { "page": "figure_barPlot", "title": "Detect and display all bar plot objects.", "topics": [ "figure_barPlot" ] }, { "page": "figure_detectAllPoints", "title": "Automated detection of plotted points from a scatter-plot figure image.", "topics": [ "figure_detectAllPoints" ] }, { "page": "figure_detectAxis", "title": "Detect an axis from a figure image.", "topics": [ "figure_detectAxis" ] }, { "page": "figure_display", "title": "Displays an image plot.", "topics": [ "figure_display" ] }, { "page": "figure_displayDetectedPoints", "title": "Displays detected points on figure.", "topics": [ "figure_displayDetectedPoints" ] }, { "page": "figure_displayDetections", "title": "Displays the detected figure objects.", "topics": [ "figure_displayDetections" ] }, { "page": "figure_extractDetectedPoints", "title": "Extracts data points from a detected image.", "topics": [ "figure_extractDetectedPoints" ] }, { "page": "figure_read", "title": "Reads/loads a figure image from file.", "topics": [ "figure_read" ] }, { "page": 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